Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sptbn4E9PX29 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sptbn4E9PX29 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sptbn4E9PX29 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.82□□□□□ -0.2
Sptbn4E9PX29 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Gm15483-201ENSMUST00000120338 456 ntBASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Gm10499-201ENSMUST00000174094 934 ntBASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Gm3436-201ENSMUST00000179930 840 ntBASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sptbn4E9PX29 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Mir6392-201ENSMUST00000184924 108 ntBASIC13.8□□□□□ -0.2
Sptbn4E9PX29 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Gm5566-201ENSMUST00000116118 459 ntBASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.8□□□□□ -0.2
Sptbn4E9PX29 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sptbn4E9PX29 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Gm28760-201ENSMUST00000185995 736 ntBASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Gm16026-204ENSMUST00000162652 683 ntBASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Dupd1-202ENSMUST00000224735 548 ntBASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Gm15823-201ENSMUST00000064305 670 ntBASIC13.79□□□□□ -0.2
Sptbn4E9PX29 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms