Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.59□□□□□ -0.23
Dchs1E9PVD3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Gm7787-201ENSMUST00000216858 688 ntBASIC13.59□□□□□ -0.23
Dchs1E9PVD3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Dchs1E9PVD3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Dchs1E9PVD3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.23
Dchs1E9PVD3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Dchs1E9PVD3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Dchs1E9PVD3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Dchs1E9PVD3 Gm18057-201ENSMUST00000208220 503 ntBASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Dchs1E9PVD3 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.57□□□□□ -0.24
Dchs1E9PVD3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Gm2810-201ENSMUST00000118681 990 ntBASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Gm44719-201ENSMUST00000206404 149 ntBASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dchs1E9PVD3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Gm9385-201ENSMUST00000117563 472 ntBASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Syt7-205ENSMUST00000224135 1557 ntBASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms