Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syce3B5KM66 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syce3B5KM66 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Syce3B5KM66 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Syce3B5KM66 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.77■□□□□ 0.43
Syce3B5KM66 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syce3B5KM66 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Syce3B5KM66 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Gm13474-201ENSMUST00000122466 815 ntBASIC17.76■□□□□ 0.43
Syce3B5KM66 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Syce3B5KM66 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.76■□□□□ 0.43
Syce3B5KM66 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Syce3B5KM66 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syce3B5KM66 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Syce3B5KM66 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Syce3B5KM66 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.75■□□□□ 0.43
Syce3B5KM66 Gm26039-201ENSMUST00000158152 144 ntBASIC17.75■□□□□ 0.43
Syce3B5KM66 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.75■□□□□ 0.43
Syce3B5KM66 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Syce3B5KM66 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Syce3B5KM66 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syce3B5KM66 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Syce3B5KM66 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.75■□□□□ 0.43
Syce3B5KM66 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Syce3B5KM66 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Gm13168-201ENSMUST00000121771 632 ntBASIC17.74■□□□□ 0.43
Syce3B5KM66 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.74■□□□□ 0.43
Syce3B5KM66 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.74■□□□□ 0.43
Syce3B5KM66 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Gm7367-201ENSMUST00000057611 492 ntBASIC17.74■□□□□ 0.43
Syce3B5KM66 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.74■□□□□ 0.43
Syce3B5KM66 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.74■□□□□ 0.43
Syce3B5KM66 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Syce3B5KM66 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syce3B5KM66 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.73■□□□□ 0.43
Syce3B5KM66 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.73■□□□□ 0.43
Syce3B5KM66 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.73■□□□□ 0.43
Syce3B5KM66 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Gm2274-201ENSMUST00000184539 609 ntBASIC17.73■□□□□ 0.43
Syce3B5KM66 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Syce3B5KM66 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms