Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn2B2RVW2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn2B2RVW2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn2B2RVW2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm22065-201ENSMUST00000103753 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm22066-201ENSMUST00000103761 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24932-201ENSMUST00000103763 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24115-201ENSMUST00000103799 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm22190-201ENSMUST00000103827 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm22191-201ENSMUST00000103831 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24721-201ENSMUST00000103849 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm28018-201ENSMUST00000103869 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm26399-201ENSMUST00000103937 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24158-201ENSMUST00000175263 71 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm25349-201ENSMUST00000177728 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm23616-201ENSMUST00000177797 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm25871-201ENSMUST00000177816 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24752-201ENSMUST00000178240 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24496-201ENSMUST00000178287 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm25649-201ENSMUST00000178476 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm25548-201ENSMUST00000178681 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm23147-201ENSMUST00000178841 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm26095-201ENSMUST00000179270 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm22171-201ENSMUST00000179283 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm23936-201ENSMUST00000179354 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm22619-201ENSMUST00000179516 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm25255-201ENSMUST00000179579 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24755-201ENSMUST00000179691 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm26506-201ENSMUST00000179692 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm25086-201ENSMUST00000179931 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm23243-201ENSMUST00000180047 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm24659-201ENSMUST00000180212 110 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms