Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Dupd1-202ENSMUST00000224735 548 ntBASIC19.78■□□□□ 0.76
Scn7aB1AYL1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Gm18766-201ENSMUST00000189811 808 ntBASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Gm38225-201ENSMUST00000194001 393 ntBASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn7aB1AYL1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn7aB1AYL1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn7aB1AYL1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn7aB1AYL1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn7aB1AYL1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Gm8410-201ENSMUST00000117225 605 ntBASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Gm13464-201ENSMUST00000119418 935 ntBASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Gm14767-201ENSMUST00000121559 586 ntBASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Gm27437-201ENSMUST00000183429 107 ntBASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Gm27306-201ENSMUST00000183970 107 ntBASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn7aB1AYL1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Mir6977-201ENSMUST00000184960 64 ntBASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn7aB1AYL1 Dancr-204ENSMUST00000132389 2347 ntBASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Gm5479-201ENSMUST00000160578 435 ntBASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn7aB1AYL1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn7aB1AYL1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn7aB1AYL1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.73■□□□□ 0.75
Scn7aB1AYL1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.73■□□□□ 0.75
Scn7aB1AYL1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn7aB1AYL1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn7aB1AYL1 Gm43703-201ENSMUST00000200523 763 ntBASIC19.73■□□□□ 0.75
Scn7aB1AYL1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms