Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Gm16215-201ENSMUST00000161990 637 ntBASIC17.11■□□□□ 0.33
Krt28A6BLY7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.11■□□□□ 0.33
Krt28A6BLY7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.11■□□□□ 0.33
Krt28A6BLY7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Krt28A6BLY7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Gm9794-201ENSMUST00000202370 423 ntBASIC17.1■□□□□ 0.33
Krt28A6BLY7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.1■□□□□ 0.33
Krt28A6BLY7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Krt28A6BLY7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Gm44855-201ENSMUST00000205725 362 ntBASIC17.09■□□□□ 0.33
Krt28A6BLY7 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.09■□□□□ 0.33
Krt28A6BLY7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt28A6BLY7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt28A6BLY7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt28A6BLY7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt28A6BLY7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt28A6BLY7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt28A6BLY7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt28A6BLY7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Gm43433-201ENSMUST00000196573 481 ntBASIC17.08■□□□□ 0.32
Krt28A6BLY7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt28A6BLY7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Krt28A6BLY7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt28A6BLY7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt28A6BLY7 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.07■□□□□ 0.32
Krt28A6BLY7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt28A6BLY7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt28A6BLY7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms