Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.49□□□□□ -0.41
Chd6A3KFM7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Gm29787-201ENSMUST00000222129 849 ntBASIC12.49□□□□□ -0.41
Chd6A3KFM7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.49□□□□□ -0.41
Chd6A3KFM7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.49□□□□□ -0.41
Chd6A3KFM7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Gm5187-201ENSMUST00000117317 991 ntBASIC12.48□□□□□ -0.41
Chd6A3KFM7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.48□□□□□ -0.41
Chd6A3KFM7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.48□□□□□ -0.41
Chd6A3KFM7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.48□□□□□ -0.41
Chd6A3KFM7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd6A3KFM7 Gm24514-201ENSMUST00000174961 285 ntBASIC12.47□□□□□ -0.41
Chd6A3KFM7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Gm18624-201ENSMUST00000220966 658 ntBASIC12.47□□□□□ -0.41
Chd6A3KFM7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.47□□□□□ -0.41
Chd6A3KFM7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Gm36967-201ENSMUST00000193814 266 ntBASIC12.47□□□□□ -0.41
Chd6A3KFM7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.47□□□□□ -0.41
Chd6A3KFM7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.47□□□□□ -0.41
Chd6A3KFM7 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.47□□□□□ -0.41
Chd6A3KFM7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd6A3KFM7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.46□□□□□ -0.41
Chd6A3KFM7 Gm14723-201ENSMUST00000118686 215 ntBASIC12.46□□□□□ -0.41
Chd6A3KFM7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd6A3KFM7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd6A3KFM7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd6A3KFM7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.46□□□□□ -0.42
Chd6A3KFM7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Chd6A3KFM7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chd6A3KFM7 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.46□□□□□ -0.42
Chd6A3KFM7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd6A3KFM7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms