Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm22065-201ENSMUST00000103753 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm22066-201ENSMUST00000103761 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24932-201ENSMUST00000103763 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24115-201ENSMUST00000103799 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm22190-201ENSMUST00000103827 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm22191-201ENSMUST00000103831 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24721-201ENSMUST00000103849 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm28018-201ENSMUST00000103869 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm26399-201ENSMUST00000103937 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm25349-201ENSMUST00000177728 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm23616-201ENSMUST00000177797 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm25871-201ENSMUST00000177816 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24752-201ENSMUST00000178240 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24496-201ENSMUST00000178287 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm25649-201ENSMUST00000178476 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm25548-201ENSMUST00000178681 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm23147-201ENSMUST00000178841 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm26095-201ENSMUST00000179270 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm22171-201ENSMUST00000179283 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm23936-201ENSMUST00000179354 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm22619-201ENSMUST00000179516 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm25255-201ENSMUST00000179579 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24755-201ENSMUST00000179691 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm26506-201ENSMUST00000179692 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm25086-201ENSMUST00000179931 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm23243-201ENSMUST00000180047 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24659-201ENSMUST00000180212 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm24169-201ENSMUST00000180244 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm23689-201ENSMUST00000180354 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm27359-201ENSMUST00000184153 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm27785-201ENSMUST00000184268 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm27466-201ENSMUST00000184396 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm27703-201ENSMUST00000184836 110 ntBASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3aA2ASI5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Scn3aA2ASI5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn3aA2ASI5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Gm2810-201ENSMUST00000118681 990 ntBASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3aA2ASI5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Scn3aA2ASI5 Gm27920-201ENSMUST00000183953 96 ntBASIC17.13■□□□□ 0.33
Scn3aA2ASI5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms