Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Thap2-203ENSMUST00000218989 527 ntBASIC16.16■□□□□ 0.18
Scn1aA2APX8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Gm15427-201ENSMUST00000117288 531 ntBASIC16.16■□□□□ 0.18
Scn1aA2APX8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.16■□□□□ 0.18
Scn1aA2APX8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.16■□□□□ 0.18
Scn1aA2APX8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn1aA2APX8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Gm2756-201ENSMUST00000195851 400 ntBASIC16.15■□□□□ 0.18
Scn1aA2APX8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.15■□□□□ 0.18
Scn1aA2APX8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Scn1aA2APX8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.14■□□□□ 0.17
Scn1aA2APX8 Gm24513-201ENSMUST00000174964 138 ntBASIC16.14■□□□□ 0.17
Scn1aA2APX8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.14■□□□□ 0.17
Scn1aA2APX8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn1aA2APX8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Gm16198-201ENSMUST00000118766 670 ntBASIC16.13■□□□□ 0.17
Scn1aA2APX8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn1aA2APX8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms