Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv29A0A0G2LB96 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Gm25406-201ENSMUST00000157599 105 ntBASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv29A0A0G2LB96 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.86□□□□□ -0.35
Trbv29A0A0G2LB96 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Gm10013-201ENSMUST00000106074 672 ntBASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv29A0A0G2LB96 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms