Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9d-4A0A0G2JG37 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm18421-201ENSMUST00000204122 625 ntBASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 AC175538.1-201ENSMUST00000225343 1269 ntBASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9d-4A0A0G2JG37 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms