Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm2651-201ENSMUST00000203560 838 ntBASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm36967-201ENSMUST00000193814 266 ntBASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm6376-201ENSMUST00000209407 580 ntBASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-4A0A0G2JG01 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm13312-201ENSMUST00000119631 718 ntBASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms