Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm37722-201ENSMUST00000193757 208 ntBASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm21559-201ENSMUST00000220638 855 ntBASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm8587-201ENSMUST00000076538 843 ntBASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms