Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm7222-201ENSMUST00000117512 906 ntBASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm27741-201ENSMUST00000185060 237 ntBASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm37153-201ENSMUST00000193637 231 ntBASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4a-psA0A0G2JFS9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.77■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gm18489-201ENSMUST00000172565 551 ntBASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.76■□□□□ 0.59
Atg4a-psA0A0G2JFS9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms