Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Actl10-202ENSMUST00000226583 1501 ntBASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm27463-201ENSMUST00000183569 57 ntBASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Rubie-203ENSMUST00000227803 2430 ntBASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mir1199-201ENSMUST00000117015 119 ntBASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm18115-201ENSMUST00000221209 621 ntBASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms