Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.27□□□□□ -0.13
Ighv1-42A0A0A6YY38 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm2272-201ENSMUST00000194903 582 ntBASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm8396-201ENSMUST00000057361 823 ntBASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-42A0A0A6YY38 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm14701-201ENSMUST00000117156 348 ntBASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-42A0A0A6YY38 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms