Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm21559-201ENSMUST00000220638 855 ntBASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm18032-201ENSMUST00000222541 538 ntBASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm8587-201ENSMUST00000076538 843 ntBASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Actl10-202ENSMUST00000226583 1501 ntBASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6n-6A0A075B6B2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm11355-201ENSMUST00000121120 306 ntBASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm25016-201ENSMUST00000158399 131 ntBASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm18115-201ENSMUST00000221209 621 ntBASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms