Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Gm25406-201ENSMUST00000157599 105 ntBASIC12.72□□□□□ -0.37
Trav18A0A075B656 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.72□□□□□ -0.37
Trav18A0A075B656 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.72□□□□□ -0.37
Trav18A0A075B656 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav18A0A075B656 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Gm7367-201ENSMUST00000057611 492 ntBASIC12.72□□□□□ -0.37
Trav18A0A075B656 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav18A0A075B656 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Gm15794-201ENSMUST00000120182 631 ntBASIC12.71□□□□□ -0.37
Trav18A0A075B656 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav18A0A075B656 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav18A0A075B656 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav18A0A075B656 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav18A0A075B656 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav18A0A075B656 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Trav18A0A075B656 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav18A0A075B656 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Gm23634-201ENSMUST00000175071 91 ntBASIC12.7□□□□□ -0.38
Trav18A0A075B656 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.7□□□□□ -0.38
Trav18A0A075B656 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.7□□□□□ -0.38
Trav18A0A075B656 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.7□□□□□ -0.38
Trav18A0A075B656 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav18A0A075B656 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms