Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Gm11927-201ENSMUST00000118472 759 ntBASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Appbp2os-202ENSMUST00000206972 447 ntBASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Gm7514-201ENSMUST00000209475 934 ntBASIC10.46□□□□□ -0.73
Trav3-4A0A075B654 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav3-4A0A075B654 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Gm17661-201ENSMUST00000170317 270 ntBASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Gm25927-201ENSMUST00000175058 117 ntBASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Gm21956-201ENSMUST00000179946 522 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms