Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-2A0A075B649 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Gm2274-201ENSMUST00000184539 609 ntBASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-2A0A075B649 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms