Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Gm25990-201ENSMUST00000102440 86 ntBASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-1A0A075B644 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Gm18206-201ENSMUST00000207027 926 ntBASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav13-1A0A075B644 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13-1A0A075B644 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-1A0A075B644 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms