Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Gm20760-201ENSMUST00000179197 648 ntBASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Gm2274-201ENSMUST00000184539 609 ntBASIC11.75□□□□□ -0.53
Trav16nA0A075B634 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16nA0A075B634 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav16nA0A075B634 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Gm13168-201ENSMUST00000121771 632 ntBASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Gm10566-201ENSMUST00000086739 996 ntBASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav16nA0A075B634 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms