Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gm25990-201ENSMUST00000102440 86 ntBASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-1A0A075B606 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 AW822252-206ENSMUST00000208904 237 ntBASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Trav13d-1A0A075B606 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms