Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm15467-201ENSMUST00000120582 445 ntBASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm12260-201ENSMUST00000122447 411 ntBASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm8318-201ENSMUST00000182954 872 ntBASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-1A0A075B5Z7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-1A0A075B5Z7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm4899-201ENSMUST00000178708 719 ntBASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms