Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.53■□□□□ 0.08
Trbv4A0A075B5I2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.52■□□□□ 0.08
Trbv4A0A075B5I2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv4A0A075B5I2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv4A0A075B5I2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Gm9103-201ENSMUST00000119371 405 ntBASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Gm11780-201ENSMUST00000136880 516 ntBASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Gm27646-201ENSMUST00000183989 110 ntBASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms