Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb2S4R1M3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb2S4R1M3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Gm14722-201ENSMUST00000118943 689 ntBASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Gm28033-201ENSMUST00000184224 96 ntBASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
H2afb2S4R1M3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Gm8097-201ENSMUST00000117903 829 ntBASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb2S4R1M3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms