Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gm14822-201ENSMUST00000122247 291 ntBASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Gm23935-201ENSMUST00000102303 57 ntBASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Gm24270-201ENSMUST00000102326 57 ntBASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Gm24245-201ENSMUST00000157318 57 ntBASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcb1Q9Z0H3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Grk6-207ENSMUST00000225925 2769 ntBASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Gm5177-201ENSMUST00000183092 997 ntBASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Gm2272-201ENSMUST00000194903 582 ntBASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Gm44492-201ENSMUST00000197012 141 ntBASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcb1Q9Z0H3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms