Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Mir6404-201ENSMUST00000183699 94 ntBASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm8520-201ENSMUST00000186517 868 ntBASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.16□□□□□ -0.3
Cx3cr1Q9Z0D9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.15□□□□□ -0.3
Cx3cr1Q9Z0D9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cx3cr1Q9Z0D9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cx3cr1Q9Z0D9 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.13□□□□□ -0.31
Cx3cr1Q9Z0D9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.13□□□□□ -0.31
Cx3cr1Q9Z0D9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cr1Q9Z0D9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cr1Q9Z0D9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cr1Q9Z0D9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cr1Q9Z0D9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms