Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Gm27459-201ENSMUST00000184860 107 ntBASIC14.62□□□□□ -0.07
Trim3Q9R1R2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim3Q9R1R2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim3Q9R1R2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Gm12644-201ENSMUST00000119935 606 ntBASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Gm27867-201ENSMUST00000184778 125 ntBASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim3Q9R1R2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Gm43347-201ENSMUST00000200226 580 ntBASIC14.59□□□□□ -0.07
Trim3Q9R1R2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms