Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atp6ap1Q9R1Q9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atp6ap1Q9R1Q9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atp6ap1Q9R1Q9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atp6ap1Q9R1Q9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm6376-201ENSMUST00000209407 580 ntBASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Rps4l-201ENSMUST00000071745 943 ntBASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atp6ap1Q9R1Q9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm13418-201ENSMUST00000119097 944 ntBASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm11780-201ENSMUST00000136880 516 ntBASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atp6ap1Q9R1Q9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms