Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Gm12350-201ENSMUST00000121208 462 ntBASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr2e3Q9QXZ7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr2e3Q9QXZ7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr2e3Q9QXZ7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Nr2e3Q9QXZ7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr2e3Q9QXZ7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr2e3Q9QXZ7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Mir5126-201ENSMUST00000175513 77 ntBASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Gm37153-201ENSMUST00000193637 231 ntBASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Nr2e3Q9QXZ7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Gm13036-201ENSMUST00000117799 748 ntBASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Gm15590-201ENSMUST00000078419 552 ntBASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nr2e3Q9QXZ7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Gm11764-201ENSMUST00000120221 623 ntBASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Gm18733-201ENSMUST00000173950 856 ntBASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Gm8318-201ENSMUST00000182954 872 ntBASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms