Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf3Q9QXK7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Gm43514-201ENSMUST00000198852 424 ntBASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Gm18206-201ENSMUST00000207027 926 ntBASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Psmb5-202ENSMUST00000227257 622 ntBASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cpsf3Q9QXK7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Gm4899-201ENSMUST00000178708 719 ntBASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.65■□□□□ 0.26
Cpsf3Q9QXK7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cpsf3Q9QXK7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cpsf3Q9QXK7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Gm27525-201ENSMUST00000184465 107 ntBASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Gm5364-201ENSMUST00000216789 889 ntBASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpsf3Q9QXK7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf3Q9QXK7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms