Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Gm10566-201ENSMUST00000086739 996 ntBASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Gm715-201ENSMUST00000117865 831 ntBASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn5Q9JL35 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn5Q9JL35 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Gm12134-201ENSMUST00000122109 520 ntBASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn5Q9JL35 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Mir6404-201ENSMUST00000183699 94 ntBASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn5Q9JL35 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.46■□□□□ 0.38
Hmgn5Q9JL35 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn5Q9JL35 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms