Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3bQ9ES34 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3bQ9ES34 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3bQ9ES34 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3bQ9ES34 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ube3bQ9ES34 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Gm4995-201ENSMUST00000117247 432 ntBASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Gm37935-201ENSMUST00000192012 982 ntBASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Dancr-204ENSMUST00000132389 2347 ntBASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3bQ9ES34 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ube3bQ9ES34 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.39■□□□□ 0.54
Ube3bQ9ES34 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.39■□□□□ 0.54
Ube3bQ9ES34 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ube3bQ9ES34 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.39■□□□□ 0.53
Ube3bQ9ES34 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Gm17968-201ENSMUST00000194902 784 ntBASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3bQ9ES34 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3bQ9ES34 Prob1-201ENSMUST00000097619 3021 ntBASIC18.36■□□□□ 0.53
Ube3bQ9ES34 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3bQ9ES34 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube3bQ9ES34 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms