Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp1bQ9EPL6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp1bQ9EPL6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp1bQ9EPL6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp1bQ9EPL6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp1bQ9EPL6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp1bQ9EPL6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms