Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Gm37856-201ENSMUST00000191634 999 ntBASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Trmt13-210ENSMUST00000198454 880 ntBASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmg20aQ9DC33 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmg20aQ9DC33 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmg20aQ9DC33 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmg20aQ9DC33 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Gm12527-201ENSMUST00000117967 564 ntBASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Gm17661-201ENSMUST00000170317 270 ntBASIC14.2□□□□□ -0.14
Hmg20aQ9DC33 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms