Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rrp8Q9DB85 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Mir6990-201ENSMUST00000183724 91 ntBASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rrp8Q9DB85 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gm12008-201ENSMUST00000117791 755 ntBASIC15.14■□□□□ 0.01
Rrp8Q9DB85 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.14■□□□□ 0.01
Rrp8Q9DB85 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rrp8Q9DB85 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms