Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2aQ9DB34 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chmp2aQ9DB34 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp2aQ9DB34 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp2aQ9DB34 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp2aQ9DB34 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Chmp2aQ9DB34 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2aQ9DB34 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Gm15173-201ENSMUST00000122049 433 ntBASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Mzt1-203ENSMUST00000227948 952 ntBASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2aQ9DB34 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms