Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Vps28Q9D1C8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Asic1-205ENSMUST00000228185 1818 ntBASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Gm12350-201ENSMUST00000121208 462 ntBASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.89■□□□□ 0.13
Vps28Q9D1C8 AV026068-213ENSMUST00000223675 1171 ntBASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps28Q9D1C8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Gm6443-201ENSMUST00000203599 874 ntBASIC15.88■□□□□ 0.13
Vps28Q9D1C8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps28Q9D1C8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Gm15590-201ENSMUST00000078419 552 ntBASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Grk6-207ENSMUST00000225925 2769 ntBASIC15.87■□□□□ 0.13
Vps28Q9D1C8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms