Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rer1Q9CQU3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rer1Q9CQU3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rer1Q9CQU3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rer1Q9CQU3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 AA414768-201ENSMUST00000121924 1257 ntBASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rer1Q9CQU3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Gm13312-201ENSMUST00000119631 718 ntBASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Gm6659-201ENSMUST00000174752 547 ntBASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Mir7071-201ENSMUST00000184847 69 ntBASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rer1Q9CQU3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rer1Q9CQU3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms