Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm18489-201ENSMUST00000172565 551 ntBASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Sec61bQ9CQS8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Sec61bQ9CQS8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Sec61bQ9CQS8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.08
Sec61bQ9CQS8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
Sec61bQ9CQS8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC8.34□□□□□ -1.08
Sec61bQ9CQS8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gm25025-201ENSMUST00000175018 111 ntBASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gm28195-201ENSMUST00000186992 372 ntBASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Fam105a-203ENSMUST00000226170 3043 ntBASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sec61bQ9CQS8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sec61bQ9CQS8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms