Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa3Q9CQ71 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa3Q9CQ71 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44357-201ENSMUST00000195897 142 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm19658-201ENSMUST00000196231 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44367-201ENSMUST00000196836 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44350-201ENSMUST00000197197 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44390-201ENSMUST00000197533 144 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44313-201ENSMUST00000198018 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44486-201ENSMUST00000198508 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44314-201ENSMUST00000199263 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44394-201ENSMUST00000199558 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44484-201ENSMUST00000199873 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44466-201ENSMUST00000200264 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm44359-201ENSMUST00000200671 138 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa3Q9CQ71 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa3Q9CQ71 Rps4l-201ENSMUST00000071745 943 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms