Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.4■□□□□ 0.06
Trim33Q99PP7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Gm7153-201ENSMUST00000117092 455 ntBASIC15.4■□□□□ 0.06
Trim33Q99PP7 Gm4459-201ENSMUST00000118750 468 ntBASIC15.4■□□□□ 0.06
Trim33Q99PP7 Gm12497-201ENSMUST00000138778 237 ntBASIC15.4■□□□□ 0.06
Trim33Q99PP7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.4■□□□□ 0.06
Trim33Q99PP7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim33Q99PP7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim33Q99PP7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.39■□□□□ 0.05
Trim33Q99PP7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Gm27459-201ENSMUST00000184860 107 ntBASIC15.39■□□□□ 0.05
Trim33Q99PP7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Gm43347-201ENSMUST00000200226 580 ntBASIC15.39■□□□□ 0.05
Trim33Q99PP7 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.39■□□□□ 0.05
Trim33Q99PP7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim33Q99PP7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trim33Q99PP7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms