Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tpgs1Q99MS8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tpgs1Q99MS8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Gm4899-201ENSMUST00000178708 719 ntBASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.12■□□□□ 0.17
Tpgs1Q99MS8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpgs1Q99MS8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpgs1Q99MS8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpgs1Q99MS8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpgs1Q99MS8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms