Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Gm6257-201ENSMUST00000163864 910 ntBASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Mir6404-201ENSMUST00000183699 94 ntBASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkd1Q99MH6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Gm5587-201ENSMUST00000206270 674 ntBASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkd1Q99MH6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms