Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm23936-201ENSMUST00000179354 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm22619-201ENSMUST00000179516 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm25255-201ENSMUST00000179579 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24755-201ENSMUST00000179691 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm26506-201ENSMUST00000179692 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm25086-201ENSMUST00000179931 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm23243-201ENSMUST00000180047 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24659-201ENSMUST00000180212 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24169-201ENSMUST00000180244 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm23689-201ENSMUST00000180354 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm27359-201ENSMUST00000184153 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm27785-201ENSMUST00000184268 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm27466-201ENSMUST00000184396 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm27703-201ENSMUST00000184836 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm44487-201ENSMUST00000205145 325 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Gm18057-201ENSMUST00000208220 503 ntBASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-1Q99MA9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Gm5779-201ENSMUST00000218467 910 ntBASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx6-1Q99MA9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx6-1Q99MA9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms