Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Gm15467-201ENSMUST00000120582 445 ntBASIC14.43□□□□□ -0.1
Cdca3Q99M54 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Gm43575-201ENSMUST00000196420 516 ntBASIC14.43□□□□□ -0.1
Cdca3Q99M54 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdca3Q99M54 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdca3Q99M54 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Gm11779-201ENSMUST00000118541 368 ntBASIC14.42□□□□□ -0.1
Cdca3Q99M54 Gm12260-201ENSMUST00000122447 411 ntBASIC14.42□□□□□ -0.1
Cdca3Q99M54 Mir5126-201ENSMUST00000175513 77 ntBASIC14.42□□□□□ -0.1
Cdca3Q99M54 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdca3Q99M54 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.41□□□□□ -0.1
Cdca3Q99M54 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdca3Q99M54 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdca3Q99M54 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.4□□□□□ -0.1
Cdca3Q99M54 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms