Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf3Q99LI7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf3Q99LI7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.03■□□□□ -0
Cstf3Q99LI7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf3Q99LI7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cstf3Q99LI7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf3Q99LI7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cstf3Q99LI7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf3Q99LI7 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.03■□□□□ -0
Cstf3Q99LI7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf3Q99LI7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.02■□□□□ -0
Cstf3Q99LI7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.02■□□□□ -0
Cstf3Q99LI7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf3Q99LI7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf3Q99LI7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf3Q99LI7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf3Q99LI7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf3Q99LI7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf3Q99LI7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf3Q99LI7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf3Q99LI7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15□□□□□ -0.01
Cstf3Q99LI7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Gm27704-201ENSMUST00000185094 107 ntBASIC15□□□□□ -0.01
Cstf3Q99LI7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms