Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Mir7023-201ENSMUST00000185093 64 ntBASIC17.84■□□□□ 0.45
Rfc4Q99J62 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.84■□□□□ 0.45
Rfc4Q99J62 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfc4Q99J62 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfc4Q99J62 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfc4Q99J62 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfc4Q99J62 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfc4Q99J62 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfc4Q99J62 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rfc4Q99J62 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.83■□□□□ 0.45
Rfc4Q99J62 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.83■□□□□ 0.44
Rfc4Q99J62 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.83■□□□□ 0.44
Rfc4Q99J62 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfc4Q99J62 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Gm43125-201ENSMUST00000201724 730 ntBASIC17.82■□□□□ 0.44
Rfc4Q99J62 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.82■□□□□ 0.44
Rfc4Q99J62 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rfc4Q99J62 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfc4Q99J62 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Gm12008-201ENSMUST00000117791 755 ntBASIC17.81■□□□□ 0.44
Rfc4Q99J62 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.81■□□□□ 0.44
Rfc4Q99J62 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfc4Q99J62 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.81■□□□□ 0.44
Rfc4Q99J62 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc4Q99J62 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms