Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Col20a1Q923P0 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.29■□□□□ 0.52
Col20a1Q923P0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.29■□□□□ 0.52
Col20a1Q923P0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.28■□□□□ 0.52
Col20a1Q923P0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col20a1Q923P0 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.27■□□□□ 0.52
Col20a1Q923P0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Gm10499-201ENSMUST00000174094 934 ntBASIC18.27■□□□□ 0.52
Col20a1Q923P0 Gm27301-201ENSMUST00000184012 127 ntBASIC18.27■□□□□ 0.52
Col20a1Q923P0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Gm45747-201ENSMUST00000212203 999 ntBASIC18.27■□□□□ 0.52
Col20a1Q923P0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.27■□□□□ 0.52
Col20a1Q923P0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col20a1Q923P0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Gm12008-201ENSMUST00000117791 755 ntBASIC18.26■□□□□ 0.51
Col20a1Q923P0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Thap2-203ENSMUST00000218989 527 ntBASIC18.26■□□□□ 0.51
Col20a1Q923P0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.26■□□□□ 0.51
Col20a1Q923P0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col20a1Q923P0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms